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• 2016

  Anchoring genome sequence to chromosomes of the central bearded dragon (Pogona vitticeps) enables reconstruction of ancestral squamate macrochromosomes and identifies sequence content of the Z chromosome

  DEAKIN, J., Edwards, M., Patel, H., O'Meally, D., Lian, J., Rachael, S., Ryan, S., LIVERNOIS, A., Azad, B., HOLLELEY, C., Li, Q. & GEORGES, A., 2016, In: BMC Genomics. 17, 1, p. 447-461 15 p., 447.

  Research output: Contribution to journal › Article › peer-review

  Open Access

  • Chromosomes
  • Genome
  • Lizards
  • Cytogenetics
  • Sex Chromosomes
  20 Citations (Scopus)

• Evolution and comparative analysis of the bat MHC-I region

  Ng, J., Tachedjian, M., DEAKIN, J., Wynne, J. W., Cui, J., Haring, V. R., Broz, I., Chen, H., Belov, K., Wang, L. & Baker, M. L., 2016, In: Scientific Reports. 6, Online, p. 1-18 18 p.

  Research output: Contribution to journal › Article › peer-review

  Open Access

  File

  • Chiroptera
  • Genes
  • Eutheria
  • Peptides
  • Infection Control
  20 Citations (Scopus)

  8 Downloads (Pure)

• Identification of interleukin genes in Pogona vitticeps using a de novo transcriptome assembly from RNA-seq data

  LIVERNOIS, A., HARDY, K., DOMASCHENZ, R., Papanicolaou, A., GEORGES, A., SARRE, S., RAO, S., EZAZ, T. & DEAKIN, J., 2016, In: Immunogenetics. 68, 9, p. 719-731 13 p.

  Research output: Contribution to journal › Article › peer-review

  • Interleukins
  • Lizards
  • RNA
  • Reptiles
  • Cytokines
  2 Citations (Scopus)

• Marsupials as models for understanding the role of chromosome rearrangements in evolution and disease

  DEAKIN, J. & Kruger-Andrzejewska, M., 2016, In: Chromosoma. 125, 4, p. 633-644 12 p.

  Research output: Contribution to journal › Article › peer-review

  • Marsupialia
  • Macropodidae
  • Chromosomes
  • Karyotype
  • Chromosomal Instability
  5 Citations (Scopus)

• Telomeres, species differences, and unusual telomeres in vertebrates: presenting challenges and opportunities to understanding telomere dynamics

  Ingles, E. & DEAKIN, J., 2016, In: AIMS Genetics. 3, p. 1-24 24 p.

  Research output: Contribution to journal › Article › peer-review

  Open Access

  File

  • telomeres
  • interspecific variation
  • vertebrates
  • Metatheria
  • life history
  15 Downloads (Pure)
• 2017

  Chromosomal speciation in the genomics era: disentangling phylogenetic evolution of rock-wallabies

  Potter, S., Bragg, J., Blom, M., DEAKIN, J., Kirkpatrick, M., Eldridge, M. & Moritz, C., 2017, In: Frontiers in Genetics. 8, p. 1-18 18 p.

  Research output: Contribution to journal › Article › peer-review

  Open Access

  File
  31 Citations (Scopus)

  13 Downloads (Pure)

• Identification of candidate genes for devil facial tumour disease tumourigenesis

  Taylor, R. L., Zhang, Y., Schöning, J. P. & Deakin, J. E., 1 Dec 2017, In: Scientific Reports. 7, 1, p. 8761 8761.

  Research output: Contribution to journal › Article › peer-review

  Open Access

  File

  • Genetic Association Studies
  • Chromosomes, Human, Pair 1
  • Neoplasms
  • Genes
  • Schwann Cells
  11 Citations (Scopus)

  2 Downloads (Pure)

• Implications of monotreme and marsupial chromosome evolution on sex determination and differentiation

  DEAKIN, J., 2017, In: General and Comparative Endocrinology. 244, p. 130-138 9 p.

  Research output: Contribution to journal › Article › peer-review

  • Marsupialia
  • Sex Differentiation
  • Metatheria
  • Chromosomes
  • chromosomes
• 2018

  Adaptation and conservation insights from the koala genome

  Johnson, R. N., O’Meally, D., Chen, Z., Etherington, G. J., Ho, S. Y. W., Nash, W. J., Grueber, C. E., Cheng, Y., Whittington, C. M., Dennison, S., Peel, E., Haerty, W., O’Neill, R. J., Colgan, D., Russell, T. L., Alquezar-Planas, D. E., Attenbrow, V., Bragg, J. G., Brandies, P. A., Chong, A. Y. Y. & 34 others, Deakin, J. E., Di Palma, F., Duda, Z., Eldridge, M. D. B., Ewart, K. M., Hogg, C. J., Frankham, G. J., Georges, A., Gillett, A. K., Govendir, M., Greenwood, A. D., Hayakawa, T., Helgen, K. M., Hobbs, M., Holleley, C. E., Heider, T. N., Jones, E. A., King, A., Madden, D., Graves, J. A. M., Morris, K. M., Neaves, L. E., Patel, H. R., Polkinghorne, A., Renfree, M. B., Robin, C., Salinas, R., Tsangaras, K., Waters, P. D., Waters, S. A., Wright, B., Wilkins, M. R., Timms, P. & Belov, K., Aug 2018, In: Nature Genetics. 50, 8, p. 1102-1111 10 p.

  Research output: Contribution to journal › Article › peer-review

  Open Access

  File

  • Phascolarctidae
  • Genome
  • Marsupialia
  • Ecosystem
  • Population
  60 Citations (Scopus)

  11 Downloads (Pure)

• Chromosome Evolution in Marsupials

  Deakin, J. E., 6 Feb 2018, In: Genes. 9, 2, p. 1-15 15 p., 72.

  Research output: Contribution to journal › Article › peer-review

  Open Access

  File

  • Macropodidae
  • Marsupialia
  • Chromosomes
  • Karyotype
  • Gene Flow
  8 Citations (Scopus)

  84 Downloads (Pure)

• Cytogenetics: An important inclusion in the conservation genetics toolbox

  Potter, S. & Deakin, J. E., 20 Jul 2018, In: Pacific Conservation Biology. 24, 3, p. 280-288 9 p.

  Research output: Contribution to journal › Article › peer-review

  • conservation genetics
  • cytogenetics
  • chromosome
  • DNA
  • captive population
  2 Citations (Scopus)

• The methylation and telomere landscape in two families of marsupials with different rates of chromosome evolution

  Ingles, E. D. & Deakin, J. E., 12 Dec 2018, In: Chromosome Research. 26, 4, p. 317-332 16 p.

  Research output: Contribution to journal › Article › peer-review

  • Marsupialia
  • Macropodidae
  • Telomere
  • Methylation
  • Chromosomes
  3 Citations (Scopus)
• 2019

  Chromosomics: Bridging the Gap between Genomes and Chromosomes

  Deakin, J. E., Potter, S., O'Neill, R., Ruiz-Herrera, A., Cioffi, M. B., Eldridge, M. D. B., Fukui, K., Marshall Graves, J. A., Griffin, D., Grutzner, F., Kratochvíl, L., Miura, I., Rovatsos, M., Srikulnath, K., Wapstra, E. & Ezaz, T., 20 Aug 2019, In: Genes. 10, 8, p. 1-17 17 p.

  Research output: Contribution to journal › Article › peer-review

  Open Access

  File

  • Chromosomes
  • Genome
  • Cytogenetics
  • Cell Biology
  • Eutheria
  18 Citations (Scopus)

  16 Downloads (Pure)

• Marsupial Chromosome Evolution

  DEAKIN, J., 15 May 2019, eLS. Chichester, England: John Wiley & Sons, p. 1-8 8 p. (eLS).

  Research output: A Conference proceeding or a Chapter in Book › Entry for encyclopedia/dictionary › peer-review

  • Metatheria
  • chromosomes
  • Dasyuridae
  • Macropodidae
  • karyotyping

• Marsupial chromosomics: bridging the gap between genomes and chromosomes

  Deakin, J. E. & Potter, S., 2019, In: Reproduction, Fertility and Development. 31, 7, p. 1189-1202 14 p.

  Research output: Contribution to journal › Article › peer-review

  • Marsupialia
  • Metatheria
  • Chromosomes
  • Genome
  • chromosomes
  1 Citation (Scopus)

• Sexual conflict in action: An antagonistic relationship between maternal and paternal sex allocation in the tammar wallaby, Notamacropus eugenii

  Edwards, A. M., Cameron, E. Z., DEAKIN, J., EZAZ, T., Pereira, J. E., Ferguson-Smith, M. & Robert, K. A., 5 Apr 2019, In: Ecology and Evolution. 9, 8, p. 4340-4348 9 p.

  Research output: Contribution to journal › Article › peer-review

  Open Access

  • sexual conflict
  • sex allocation
  • Macropus eugenii
  • sex ratio
  • sperm

• Understanding the Evolution of Reptile Chromosomes through Applications of Combined Cytogenetics and Genomics Approaches

  Deakin, J. E. & Ezaz, T., 2019, In: Cytogenetic and Genome Research. 157, 1-2, p. 7-20 14 p.

  Research output: Contribution to journal › Article › peer-review

  Open Access

  • Reptiles
  • Genomics
  • Cytogenetics
  • Chromosomes
  • Sex Chromosomes
  11 Citations (Scopus)
• 2020

  Comparative cytogenetic mapping and telomere analysis provide evolutionary predictions for devil facial tumour 2

  Ingles, E. D. & Deakin, J. E., 1 May 2020, In: Genes. 11, 5, p. 1-17 17 p., 480.

  Research output: Contribution to journal › Article › peer-review

  Open Access

  File

  • Telomere
  • Cytogenetics
  • Chromosomes
  • Neoplasms
  • Chromosome Mapping
  6 Downloads (Pure)

• Evolution of Marsupial Genomes

  Deakin, J. E. & O'Neill, R. J., 15 Feb 2020, In: Annual Review of Animal Biosciences. 8, 1, p. 25-45 21 p.

  Research output: Contribution to journal › Article › peer-review

  Open Access

  • Marsupialia
  • Metatheria
  • Genome
  • genome
  • Chromosomes

• Identification of Y chromosome markers in the eastern three-lined skink (Bassiana duperreyi) using in silico whole genome subtraction

  Dissanayake, D. S. B., Holleley, C. E., Hill, L. K., O'Meally, D., Deakin, J. E. & Georges, A., 29 Sep 2020, In: BMC Genomics. 21, 1, p. 1-12 12 p., 667.

  Research output: Contribution to journal › Article › peer-review

  Open Access

  File

  • Sex Chromosomes
  • Y Chromosome
  • Genetic Markers
  • Computer Simulation
  • Genome

• The oz mammals genomics (OMG) initiative: Developing genomic resources for mammal conservation at a continental scale

  Eldridge, M. D. B., Deakin, J. E., MacDonald, A. J., Byrne, M., Fitzgerald, A., Johnson, R. N., Moritz, C., Palmer, S. & Young, A., 1 Jan 2020, In: Australian Zoologist. 40, 3, p. 505-509 5 p.

  Research output: Contribution to journal › Short survey › peer-review

  • mammals
  • genomics
  1 Citation (Scopus)