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2020

A Novel Paradigm for Sex Chromosome Turnover: Y and W Changes, X and Z Remain

Ezaz, T., 1 Sep 2020, In: BioEssays. 42, 9, p. 1-1 1 p., 2000152.

Research output: Contribution to journal › Comment/debate

Biobanking in amphibian and reptilian conservation and management: opportunities and challenges

Strand, J., Thomsen, H., Jensen, J. B., Marcussen, C., Nicolajsen, T. B., Skriver, M. B., Søgaard, I. M., Ezaz, T., Purup, S., Callesen, H. & Pertoldi, C., 1 Dec 2020, In: Conservation Genetics Resources. 12, 4, p. 709-725 17 p.

Research output: Contribution to journal › Review article › peer-review

Comparative cytogenetic survey of the giant bonytongue arapaima fish (Osteoglossiformes: Arapaimidae), across different Amazonian and Tocantins/Araguaia River Basins

de Oliveira, E. A., Sassi, F. D. M. C., Perez, M. F., Bertollo, L. A. C., Ráb, P., Ezaz, T., Hatanaka, T., Viana, P. F., Feldberg, E., de Oliveira, E. H. C. & Cioffi, M. D. B., 2020, In: Neotropical Ichthyology. 18, 4, p. 1-14 14 p., e200055.

Research output: Contribution to journal › Article › peer-review

Open Access

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Cross-species bac mapping highlights conservation of chromosome synteny across dragon lizards (Squamata Agamidae)

Alam, S. M. I., Altmanová, M., Prasongmaneerut, T., Georges, A., Sarre, S. D., Nielsen, S. V., Gamble, T., Srikulnath, K., Rovatsos, M., Kratochvíl, L. & Ezaz, T., Jun 2020, In: Genes. 11, 6, p. 1-12 12 p., 698.

Research output: Contribution to journal › Article › peer-review

Open Access

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1 Citation (Scopus)

1 Downloads (Pure)

Evidence of interspecific chromosomal diversification in rainbowfishes (Melanotaeniidae, teleostei)

Majtánová, Z., Unmack, P. J., Prasongmaneerut, T., Shams, F., Srikulnath, K., Ráb, P. & Ezaz, T., Jul 2020, In: Genes. 11, 7, p. 1-11 11 p., 818.

Research output: Contribution to journal › Special issue › peer-review

Open Access

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1 Citation (Scopus)

Genome-wide SNP analysis of Siamese cobra (Naja kaouthia) reveals the molecular basis of transitions between Z and W sex chromosomes and supports the presence of an ancestral super-sex chromosome in amniotes

Laopichienpong, N., Kraichak, E., Singchat, W., Sillapaprayoon, S., Muangmai, N., Suntrarachun, S., Baicharoen, S., Peyachoknagul, S., Chanhome, L., Ezaz, T. & Srikulnath, K., 28 Sep 2020, In: Genomics. p. 1-13 13 p.

Research output: Contribution to journal › Article › peer-review

2 Citations (Scopus)

Historical demography and climate driven distributional changes in a widespread Neotropical freshwater species with high economic importance

De Oliveira, E. A., Perez, M. F., Bertollo, L. A. C., Gestich, C. C., Ráb, P., Ezaz, T., Souza, F. H. S., Viana, P., Feldberg, E., Oliveira, E. H. C. & Cioffi, M. B., 1 Sep 2020, In: Ecography. 43, 9, p. 1291-1304 14 p.

Research output: Contribution to journal › Article › peer-review

Open Access

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1 Citation (Scopus)

Landscape of snake’ sex chromosomes evolution spanning 85 MYR reveals ancestry of sequences despite distinct evolutionary trajectories

Viana, P. F., Ezaz, T., de Bello Cioffi, M., Liehr, T., Al-Rikabi, A., Goll, L. G., Rocha, A. M. & Feldberg, E., 1 Dec 2020, In: Scientific Reports. 10, p. 1-14 14 p., 12499.

Research output: Contribution to journal › Article › peer-review

Open Access

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1 Citation (Scopus)

Molecular cytogenetic analysis in freshwater prawns of the genus macrobrachium (Crustacea: Decapoda: Palaemonidae)

Molina, W. F., Costa, G. W. W. F., Cunha, I. M. C., Bertollo, L. A. C., Ezaz, T., Liehr, T. & Cioffi, M. B., 9 Apr 2020, In: International Journal of Molecular Sciences. 21, 7, p. 1-12 12 p., 2599.

Research output: Contribution to journal › Article › peer-review

Open Access

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Multiple lines of evidence indicate limited natural recruitment of golden Perch (Macquaria ambigua) in the highly regulated Lachlan river

Shams, F., Dyer, F., Thompson, R., Duncan, R. P., Thiem, J. D., Enge, T. G. & Ezaz, T., 1 Jun 2020, In: Water (Switzerland). 12, 6, p. 1-15 15 p., 1636.

Research output: Contribution to journal › Article › peer-review

Open Access

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Revisiting the Karyotype Evolution of Neotropical Boid Snakes: A Puzzle Mediated by Chromosomal Fissions

Viana, P. F., Ezaz, T., Cioffi, M. D. B., Liehr, T., Al-Rikabi, A., Tavares-Pinheiro, R., Bertollo, L. A. C. & Feldberg, E., 10 Oct 2020, In: Cells. 9, 10, p. 1-11 11 p., 2268.

Research output: Contribution to journal › Article › peer-review

Open Access

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The Amazonian Red Side-Necked Turtle Rhinemys rufipes (Spix, 1824) (Testudines, Chelidae) Has a GSD Sex-Determining Mechanism with an Ancient XY Sex Microchromosome System

Viana, P. F., Feldberg, E., Cioffi, M. B., de Carvalho, V. T., Menezes, S., Vogt, R. C., Liehr, T. & Ezaz, T., 12 Sep 2020, In: Cells. 9, 9, p. 1-15 15 p.

Research output: Contribution to journal › Article › peer-review

Open Access

The Response of the Planorbid Snail Isidorella newcombi to Chronic Copper Exposure Over a 28-Day Period: Linking Mortality, Cellular Biomarkers, and Reproductive Responses

Ubrihien, R. P., Maher, W. A., Taylor, A. M., Stevens, M. & Ezaz, T., 22 Oct 2020, In: Archives of Environmental Contamination and Toxicology. 79, 4, p. 391-405 15 p.

Research output: Contribution to journal › Article › peer-review

2019

Application of DArT seq derived SNP tags for comparative genome analysis in fishes; An alternative pipeline using sequence data from a non-traditional model species, Macquaria ambigua

Shams, F., Dyer, F., Thompson, R., Duncan, R. P., Thiem, J. D., Kilian, A. & Ezaz, T., 2019, In: PLoS One. 14, 12, p. 1-13 13 p., e0226365.

Research output: Contribution to journal › Article › peer-review

Open Access

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1 Citation (Scopus)

5 Downloads (Pure)

Characterization of the karyotype and accumulation of repetitive sequences in Australian Darling hardyhead Craterocephalus amniculus (Atheriniformes, Teleostei)

Majtánová, Z., Moy, K. G., Unmack, P. J., Ráb, P. & Ezaz, T., 30 Jul 2019, In: PEERJ. 7, p. 1-9 9 p., e7347.

Research output: Contribution to journal › Article › peer-review

Open Access

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3 Citations (Scopus)

4 Downloads (Pure)

Chromosomics: Bridging the Gap between Genomes and Chromosomes

Deakin, J. E., Potter, S., O'Neill, R., Ruiz-Herrera, A., Cioffi, M. B., Eldridge, M. D. B., Fukui, K., Marshall Graves, J. A., Griffin, D., Grutzner, F., Kratochvíl, L., Miura, I., Rovatsos, M., Srikulnath, K., Wapstra, E. & Ezaz, T., 20 Aug 2019, In: Genes. 10, 8, p. 1-17 17 p.

Research output: Contribution to journal › Article › peer-review

Open Access

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18 Citations (Scopus)

16 Downloads (Pure)

Cytogenetics, genomics and biodiversity of the South American and African Arapaimidae fish family (Teleostei, Osteoglossiformes)

de Oliveira, E. A., Bertollo, L. A. C., Rab, P., Ezaz, T., Yano, C. F., Hatanaka, T., Jegede, O. I., Tanomtong, A., Liehr, T., Sember, A., Maruyama, S. R., Feldberg, E., Viana, P. F. & de Bello Cioffi, M., 25 Mar 2019, In: PLoS One. 14, 3, p. 1-19 19 p., e0214225.

Research output: Contribution to journal › Article › peer-review

Open Access

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7 Citations (Scopus)

7 Downloads (Pure)

Deciphering the Evolutionary History of Arowana Fishes (Teleostei, Osteoglossiformes, Osteoglossidae): Insight from Comparative Cytogenomics

Cioffi, M. D. B., Ráb, P., Ezaz, T., Bertollo, L. A. C., Lavoué, S., Oliveira, E. A. D., Sember, A., Molina, W. F., Souza, F. H. S. D., Majtánová, Z., Liehr, T., Al-Rikabi, A. B. H., Yano, C. F., Viana, P., Feldberg, E., Unmack, P., Hatanaka, T., Tanomtong, A. & Perez, M. F., 1 Sep 2019, In: International Journal of Molecular Sciences. 20, 17, p. 4296 19 p., 4296.

Research output: Contribution to journal › Article › peer-review

Open Access

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5 Citations (Scopus)

4 Downloads (Pure)

Distribution and amplification of interstitial telomeric sequences (ITSs) in Australian dragon lizards support frequent chromosome fusions in Iguania

Srikulnath, K., Azad, B., Singchat, W. & EZAZ, T., 2019, In: PLoS One. 14, 2, p. 1-11 12 p., e0212683.

Research output: Contribution to journal › Article › peer-review

Open Access

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10 Citations (Scopus)

22 Downloads (Pure)

Emerging patterns of genome organization in Notopteridae species (Teleostei, Osteoglossiformes) as revealed by Zoo-FISH and Comparative Genomic Hybridization (CGH)

Barby, F. F., Bertollo, L., De Oliveira, E. A., Yano, C. F., Hatanaka, T., Ráb, P., Sember, A., EZAZ, T., Artoni, R. F., Liehr, T., Al-Rikabi, A. B. H., Trifonov, V., de Oliveira, E. H. C., Franco Molina, W., Jegede, O. I., Tanomtong, A. & Cioffi, M. D. B., 2019, In: Scientific Reports. 9, 1, p. 1-11 11 p., 1112.

Research output: Contribution to journal › Article › peer-review

Open Access

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11 Citations (Scopus)

7 Downloads (Pure)

Evolutionary insights of the zw sex chromosomes in snakes: A new chapter added by the amazonian puffing snakes of the genus spilotes

Viana, P. F., Ezaz, T., Cioffi, M. D. B., Almeida, B. J. & Feldberg, E., Apr 2019, In: Genes. 10, 4, p. 1-16 16 p., 288.

Research output: Contribution to journal › Article › peer-review

Open Access

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4 Citations (Scopus)

19 Downloads (Pure)

Identifying sex-linked markers in Litoria aurea: a novel approach to understanding sex chromosome evolution in an amphibian

Sopniewski, J., Shams, F., Scheele, B. C., Kefford, B. & Ezaz, T., 12 Nov 2019, In: Scientific Reports. 9, 1, p. 1-10 10 p., 16591 .

Research output: Contribution to journal › Article › peer-review

Open Access

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3 Citations (Scopus)

2 Downloads (Pure)

Interspecific Genetic Differences and Historical Demography in South American Arowanas (Osteoglossiformes, Osteoglossidae, Osteoglossum)

Souza, F. H. S. D., Perez, M. F., Bertollo, L. A. C., Oliveira, E. A. D., Lavoué, S., Gestich, C. C., Ráb, P., Ezaz, T., Liehr, T., Viana, P. F., Feldberg, E. & Cioffi, M. D. B., Sep 2019, In: Genes. 10, 9, p. 1-18 18 p., 693.

Research output: Contribution to journal › Article › peer-review

Open Access

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1 Citation (Scopus)

2 Downloads (Pure)

Karyotypes and Sex Chromosomes in Two Australian Native Freshwater Fishes, Golden Perch (Macquaria ambigua) and Murray Cod (Maccullochella peelii) (Percichthyidae)

Shams, F., Dyer, F., Thompson, R., Duncan, R. P., Thiem, J. D., Majtánová, Z. & Ezaz, T., 30 Aug 2019, In: International Journal of Molecular Sciences. 20, 17, p. 1-14 14 p., 4244.

Research output: Contribution to journal › Article › peer-review

Open Access

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1 Citation (Scopus)

8 Downloads (Pure)

Molecular evidence for sex reversal in wild populations of green frogs (Rana clamitans)

Lambert, M., Tran, T., Killian, A., EZAZ, T. & Skelly, D., 8 Feb 2019, In: PEERJ. 7, 2, p. 1-21 21 p., 6449.

Research output: Contribution to journal › Article › peer-review

Open Access

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4 Citations (Scopus)

4 Downloads (Pure)

Sexual and unisexual Australian carp gudgeons (Hypseleotris, Gobioidei: Eleotridae): insight from cytogenetics

Majtanova, Z., Ezaz, T., Rab, P. & Unmack, P., 2019, p. 1-1. 1 p.

Research output: Contribution to conference (non-published works) › Paper

Open Access

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5 Downloads (Pure)

Sexual conflict in action: An antagonistic relationship between maternal and paternal sex allocation in the tammar wallaby, Notamacropus eugenii

Edwards, A. M., Cameron, E. Z., DEAKIN, J., EZAZ, T., Pereira, J. E., Ferguson-Smith, M. & Robert, K. A., 5 Apr 2019, In: Ecology and Evolution. 9, 8, p. 4340-4348 9 p.

Research output: Contribution to journal › Article › peer-review

Open Access

The Molecular Basis of Freshwater Adaptation in Prawns: Insights from Comparative Transcriptomics of Three Macrobrachium Species

Rahi, M. L., Mather, P. B., EZAZ, T. & Hurwood, D. A., 1 Apr 2019, In: Genome Biology and Evolution. 11, 4, p. 1002-1018 17 p.

Research output: Contribution to journal › Article › peer-review

Open Access

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6 Citations (Scopus)

5 Downloads (Pure)

Understanding the Evolution of Reptile Chromosomes through Applications of Combined Cytogenetics and Genomics Approaches

Deakin, J. E. & Ezaz, T., 2019, In: Cytogenetic and Genome Research. 157, 1-2, p. 7-20 14 p.

Research output: Contribution to journal › Article › peer-review

Open Access

11 Citations (Scopus)

ZW Sex Chromosomes in Australian Dragon Lizards (Agamidae) Originated from a Combination of Duplication and Translocation in the Nucleolar Organising Region

Matsubara, K., OMEALLY, D., SARRE, S. D., Georges, A., Srikulnath, K. & Ezaz, T., Nov 2019, In: Genes. 10, 11, p. 1-11 11 p.

Research output: Contribution to journal › Article › peer-review

Open Access

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7 Citations (Scopus)

10 Downloads (Pure)

2017

Highly conserved Z and molecularly diverged W chromosomes in the fish genus Triportheus (Characiformes, Triportheidae)

Yano, C., Bertollo, L., EZAZ, T., Trifonov, V., Sember, A., Liehr, T. & Cioffi, M., 1 Mar 2017, In: Heredity. 118, 3, p. 276-283 8 p.

Research output: Contribution to journal › Article › peer-review

Open Access

23 Citations (Scopus)

Lack of satellite DNA species-specific homogenization and relationship to chromosomal rearrangements in monitor lizards (Varanidae, Squamata)

Prakhongcheep, O., Thapana, W., Suntronpong, A., Singchat, W., Pattanatanang, K., Phatcharakullawarawat, R., Muangmai, N., Peyachoknagul, S., Matsubara, K., Ezaz, T. & Srikulnath, K., 2017, In: BMC Evolutionary Biology. 17, 1, p. 1-14 14 p.

Research output: Contribution to journal › Article › peer-review

Open Access

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6 Citations (Scopus)

9 Downloads (Pure)

Origin of Amniote Sex Chromosomes: An Ancestral Super-Sex Chromosome, or Common Requirements?

EZAZ, T., Srikulnath, K. & Graves, J., 2017, In: Journal of Heredity. 108, 1, p. 94-105 12 p.

Research output: Contribution to journal › Article › peer-review

Open Access

35 Citations (Scopus)

The response of Isidorella newcombi to copper exposure: Using an integrated biological framework to interpret transcriptomic responses from RNA-seq analysis

Ubrihien, R., EZAZ, T., TAYLOR, A., Stevens, M., Krikowa, F., FOSTER, S. & MAHER, B., 2017, In: Aquatic Toxicology. 185, p. 183-192 10 p.

Research output: Contribution to journal › Article › peer-review

5 Citations (Scopus)

2016

Amplification of microsatellite repeat motifs is associated with the evolutionary differentiation and heterochromatinization of sex chromosomes in Sauropsida

MATSUBARA, K., GEORGES, A., SARRE, S., Graves, J., Matsuda, Y. & EZAZ, T., 2016, In: Chromosoma. 125, 1, p. 111-123 13 p.

Research output: Contribution to journal › Article › peer-review

38 Citations (Scopus)

Evolutionary Changes in Sensitivity to Hormonally Induced Gonadal Sex Reversal in a Frog Species

Miura, I., Ohtani, H., Ogata, M. & EZAZ, T., 2016, In: Sexual Development. 10, 2, p. 79-90 12 p.

Research output: Contribution to journal › Article › peer-review

8 Citations (Scopus)

Identification of interleukin genes in Pogona vitticeps using a de novo transcriptome assembly from RNA-seq data

LIVERNOIS, A., HARDY, K., DOMASCHENZ, R., Papanicolaou, A., GEORGES, A., SARRE, S., RAO, S., EZAZ, T. & DEAKIN, J., 2016, In: Immunogenetics. 68, 9, p. 719-731 13 p.

Research output: Contribution to journal › Article › peer-review

2 Citations (Scopus)

Karyotype and Mapping of Repetitive DNAs in the African Butterfly Fish Pantodon buchholzi, the Sole Species of the Family Pantodontidae

Rab, P., Yano, C., Jegede, O., Lavoue, S., Bertollo, L., EZAZ, T., Majtanova, Z., De Oliveira, E. & Cioffi, M., 2016, In: Cytogenetic and Genome Research. 149, 4, p. 312-320 9 p.

Research output: Contribution to journal › Article › peer-review

12 Citations (Scopus)

Sex-linked markers in the North American green frog (Rana clamitans) developed using DArTseq provide early insight into sex chromosome evolution

Lambert, M., Skelly, D. & EZAZ, T., 2016, In: BMC Genomics. 17, p. 844-856 13 p.

Research output: Contribution to journal › Article › peer-review

Open Access

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27 Citations (Scopus)

7 Downloads (Pure)

2015

Immunofluorescent staining reveals hypermethylation of microchromosomes in the central bearded dragon, Pogona vitticeps

DOMASCHENZ, R., Livernois, A., RAO, S., EZAZ, T. & DEAKIN, J., 2015, In: Molecular Cytogenetics. 8, 1, p. 104-112 9 p., 104.

Research output: Contribution to journal › Article › peer-review

Open Access

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3 Citations (Scopus)

3 Downloads (Pure)

Major histocompatibility complex genes map to two chromosomes in an evolutionarily ancient reptile, the tuatara sphenodon punctatus

Miller, H. C., O’Meally, D., EZAZ, T., Amemiya, C., Graves, J. & Edwards, S., 2015, In: G3: Genes, Genomes, Genetics. 5, 7, p. 1439-1451 13 p.

Research output: Contribution to journal › Article › peer-review

5 Citations (Scopus)

Restriction site-associated DNA sequencing (RAD-seq) reveals an extraordinary number of transitions among gecko sex-determining systems

Gamble, T., Coryell, J., EZAZ, T., Lynch, J., Scantlebury, D. & Zarkower, D., 2015, In: Molecular Biology and Evolution. 32, 5, p. 1296-1309 14 p.

Research output: Contribution to journal › Article › peer-review

103 Citations (Scopus)

Sex reversal triggers the rapid transition from genetic to temperature-dependent sex

HOLLELEY, C., OMEALLY, D., SARRE, S., Graves, J., EZAZ, T., MATSUBARA, K. & GEORGES, A., 2015, In: Nature. 523, 7558, p. 79-82 4 p.

Research output: Contribution to journal › Article › peer-review

129 Citations (Scopus)

2014

Comparative epigenomics: an emerging field with breakthrough potential to understand evolution of epigenetic regulation

DEAKIN, J., DOMASCHENZ, R., LIM, C., EZAZ, T. & RAO, S., 2014, In: AIMS Genetics. 1, 1, p. 34-54 21 p.

Research output: Contribution to journal › Article › peer-review

Open Access

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4 Downloads (Pure)

Highly Differentiated ZW Sex Microchromosomes in the Australian Varanus Species Evolved through Rapid Amplification of Repetitive Sequences

MATSUBARA, K., SARRE, S., GEORGES, A., Matsuda, Y., Graves, J. & EZAZ, T., 2014, In: PLoS One. 9, 4, p. 1-9 9 p.

Research output: Contribution to journal › Article › peer-review

Open Access

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26 Citations (Scopus)

10 Downloads (Pure)

Molecular evolution of Dmrt1 accompanies change of sex-determining mechanisms in reptilia

Janes, D., Organ, C., O'Meally, D., SARRE, S., GEORGES, A., Graves, J., Valenzuela, N., Literman, R., Rutherford, K., Gemmell, N., Iverson, J., Tamplin, J., Edwards, S. V. & EZAZ, T., Dec 2014, In: Biology Letters. 10, 12, p. 1-4 4 p., 20140809.

Research output: Contribution to journal › Article › peer-review

Open Access

13 Citations (Scopus)

Non-Homologous Sex Chromosomes in Two Geckos (Gekkonidae: Gekkota) with Female Heterogamety

MATSUBARA, K., Gamble, T., Matsuda, Y., Zarkower, D., SARRE, S., GEORGES, A., Graves, J. & EZAZ, T., 2014, In: Cytogenetic and Genome Research. 143, 4, p. 251-258 8 p.

Research output: Contribution to journal › Article › peer-review