A DNA barcode database of Australia’s freshwater macroinvertebrate fauna

M. E. Carew, S. J. Nichols, J. Batovska, R. St Clair, N. P. Murphy, M. J. Blacket, M. E. Shackleton

    Research output: Contribution to journalArticle

    10 Citations (Scopus)

    Abstract

    Macroinvertebrates are widely used for monitoring freshwater ecosystems. In most monitoring programs, identifications take substantial time and expense. Methods that improve the speed, accuracy and cost-effectiveness of macroinvertebrate identification would benefit such programs. Increasingly, DNA barcodes are being used to provide accurate species-level identifications and have the potential to change how macroinvertebrates are routinely identified. Herein we discuss the need for DNA barcodes of freshwater macroinvertebrates with particular reference to Australia. We examine the use of DNA barcodes for species identification and compare DNA barcoding efforts of macroinvertebrates from Australia with those globally. We consider the role of high-throughput sequencing of DNA barcodes in freshwater bioassessment and its potential use in biosurveillance. Finally, we outline a strategy for developing a comprehensive national DNA barcode database for Australian freshwater macroinvertebrates and present the initial efforts in creating this database.
    Original languageEnglish
    Pages (from-to)1788-1802
    Number of pages15
    JournalMarine and Freshwater Research
    Volume68
    Issue number10
    DOIs
    Publication statusPublished - 2017

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    DNA barcoding
    macroinvertebrates
    macroinvertebrate
    fauna
    DNA
    biological assessment
    monitoring
    freshwater ecosystem
    cost effectiveness
    cost

    Cite this

    Carew, M. E., Nichols, S. J., Batovska, J., St Clair, R., Murphy, N. P., Blacket, M. J., & Shackleton, M. E. (2017). A DNA barcode database of Australia’s freshwater macroinvertebrate fauna. Marine and Freshwater Research, 68(10), 1788-1802. https://doi.org/10.1071/MF16304
    Carew, M. E. ; Nichols, S. J. ; Batovska, J. ; St Clair, R. ; Murphy, N. P. ; Blacket, M. J. ; Shackleton, M. E. / A DNA barcode database of Australia’s freshwater macroinvertebrate fauna. In: Marine and Freshwater Research. 2017 ; Vol. 68, No. 10. pp. 1788-1802.
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    Carew, ME, Nichols, SJ, Batovska, J, St Clair, R, Murphy, NP, Blacket, MJ & Shackleton, ME 2017, 'A DNA barcode database of Australia’s freshwater macroinvertebrate fauna', Marine and Freshwater Research, vol. 68, no. 10, pp. 1788-1802. https://doi.org/10.1071/MF16304

    A DNA barcode database of Australia’s freshwater macroinvertebrate fauna. / Carew, M. E.; Nichols, S. J.; Batovska, J.; St Clair, R.; Murphy, N. P.; Blacket, M. J.; Shackleton, M. E.

    In: Marine and Freshwater Research, Vol. 68, No. 10, 2017, p. 1788-1802.

    Research output: Contribution to journalArticle

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