TY - JOUR
T1 - Bayesian spatial analysis of cholangiocarcinoma in Northeast Thailand
AU - Suwannatrai, Apiporn T
AU - Thinkhamrop, Kavin
AU - Clements, Archie C A
AU - Kelly, Matthew
AU - Suwannatrai, Kulwadee
AU - Thinkhamrop, Bandit
AU - Khuntikeo, Narong
AU - Gray, Darren J
AU - Wangdi, Kinley
N1 - Funding Information:
This work was supported by Khon Kaen University though the CASCAP project, the National Research Council of Thailand though the Thailand Grand Challenges: Fluke Free Thailand Project, Cholangiocarcinoma Research Institute and Cholangiocarcinoma Foundation of Thailand. The study was also supported by the Data Management and Statistical Analysis Center (DAMASAC), Faculty of Public Health, KKU, Thailand.
Publisher Copyright:
© 2019, The Author(s).
PY - 2019/12/1
Y1 - 2019/12/1
N2 - Cholangiocarcinoma (CCA) is a malignant neoplasm of the biliary tract. Thailand reports the highest incidence of CCA in the world. The aim of this study was to map the distribution of CCA and identify spatial disease clusters in Northeast Thailand. Individual-level data of patients with histopathologically confirmed CCA, aggregated at the sub-district level, were obtained from the Cholangiocarcinoma Screening and Care Program (CASCAP) between February 2013 and December 2017. For analysis a multivariate Zero-inflated, Poisson (ZIP) regression model was developed. This model incorporated a conditional autoregressive (CAR) prior structure, with posterior parameters estimated using Bayesian Markov chain Monte Carlo (MCMC) simulation with Gibbs sampling. Covariates included in the models were age, sex, normalized vegetation index (NDVI), and distance to water body. There was a total of 1,299 cases out of 358,981 participants. CCA incidence increased 2.94 fold (95% credible interval [CrI] 2.62-3.31) in patients >60 years as compared to ≤60 years. Males were 2.53 fold (95% CrI: 2.24-2.85) more likely to have CCA when compared to females. CCA decreased with a 1 unit increase of NDVI (Relative Risk =0.06; 95% CrI: 0.01-0.63). When posterior means were mapped spatial clustering was evident after accounting for the model covariates. Age, sex and environmental variables were associated with an increase in the incidence of CCA. When these covariates were included in models the maps of the posterior means of the spatially structured random effects demonstrated evidence of spatial clustering.
AB - Cholangiocarcinoma (CCA) is a malignant neoplasm of the biliary tract. Thailand reports the highest incidence of CCA in the world. The aim of this study was to map the distribution of CCA and identify spatial disease clusters in Northeast Thailand. Individual-level data of patients with histopathologically confirmed CCA, aggregated at the sub-district level, were obtained from the Cholangiocarcinoma Screening and Care Program (CASCAP) between February 2013 and December 2017. For analysis a multivariate Zero-inflated, Poisson (ZIP) regression model was developed. This model incorporated a conditional autoregressive (CAR) prior structure, with posterior parameters estimated using Bayesian Markov chain Monte Carlo (MCMC) simulation with Gibbs sampling. Covariates included in the models were age, sex, normalized vegetation index (NDVI), and distance to water body. There was a total of 1,299 cases out of 358,981 participants. CCA incidence increased 2.94 fold (95% credible interval [CrI] 2.62-3.31) in patients >60 years as compared to ≤60 years. Males were 2.53 fold (95% CrI: 2.24-2.85) more likely to have CCA when compared to females. CCA decreased with a 1 unit increase of NDVI (Relative Risk =0.06; 95% CrI: 0.01-0.63). When posterior means were mapped spatial clustering was evident after accounting for the model covariates. Age, sex and environmental variables were associated with an increase in the incidence of CCA. When these covariates were included in models the maps of the posterior means of the spatially structured random effects demonstrated evidence of spatial clustering.
KW - Bayes Theorem
KW - Bile Duct Neoplasms/epidemiology
KW - Cholangiocarcinoma/epidemiology
KW - Female
KW - Humans
KW - Incidence
KW - Male
KW - Middle Aged
KW - Spatio-Temporal Analysis
KW - Thailand/epidemiology
UR - http://www.scopus.com/inward/record.url?scp=85072924076&partnerID=8YFLogxK
U2 - 10.1038/s41598-019-50476-7
DO - 10.1038/s41598-019-50476-7
M3 - Article
C2 - 31582774
SN - 2045-2322
VL - 9
SP - 1
EP - 10
JO - Scientific Reports
JF - Scientific Reports
IS - 1
M1 - 14263
ER -