Differential intron retention in Jumonji chromatin modifier genes is implicated in reptile temperature-dependent sex determination

Ira W. Deveson, Clare E. Holleley, James Blackburn, Jennifer A. Marshall Graves, John S. Mattick, Paul D. Waters, Arthur Georges

    Research output: Contribution to journalArticle

    27 Citations (Scopus)
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    Abstract

    In many vertebrates, sex of offspring is determined by external environmental cues rather than by sex chromosomes. In reptiles, for instance, temperature-dependent sex determination (TSD) is common. Despite decades of work, the mechanism by which temperature is converted into a sex-determining signal remains mysterious. This is partly because it is difficult to distinguish the primary molecular events of TSD from the confounding downstream signatures of sexual differentiation. We use the Australian central bearded dragon, in which chromosomal sex determination is overridden at high temperatures to produce sex-reversed female offspring, as a unique model to identify TSD-specific features of the transcriptome. We show that an intron is retained in mature transcripts from each of two Jumonji family genes, JARID2 and JMJD3, in female dragons that have been sex-reversed by temperature but not in normal chromosomal females or males. JARID2 is a component of the master chromatin modifier Polycomb Repressive Complex 2, and the mammalian sex-determining factor SRY is directly regulated by an independent but closely related Jumonji family member. We propose that the perturbation of JARID2/JMJD3 function by intron retention alters the epigenetic landscape to override chromosomal sex-determining cues, triggering sex reversal at extreme temperatures. Sex reversal may then facilitate a transition from genetic sex determination to TSD, with JARID2/JMJD3 intron retention preserved as the decisive regulatory signal. Significantly, we also observe sex-associated differential retention of the equivalent introns in JARID2/JMJD3 transcripts expressed in embryonic gonads from TSD alligators and turtles, indicative of a reptile-wide mechanism controlling TSD.
    Original languageEnglish
    Article numbere1700731
    JournalScience Advances
    Volume3
    Issue number6
    DOIs
    Publication statusPublished - Jun 2017

    Cite this

    Deveson, Ira W. ; Holleley, Clare E. ; Blackburn, James ; Graves, Jennifer A. Marshall ; Mattick, John S. ; Waters, Paul D. ; Georges, Arthur. / Differential intron retention in Jumonji chromatin modifier genes is implicated in reptile temperature-dependent sex determination. In: Science Advances. 2017 ; Vol. 3, No. 6.
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    title = "Differential intron retention in Jumonji chromatin modifier genes is implicated in reptile temperature-dependent sex determination",
    abstract = "In many vertebrates, sex of offspring is determined by external environmental cues rather than by sex chromosomes. In reptiles, for instance, temperature-dependent sex determination (TSD) is common. Despite decades of work, the mechanism by which temperature is converted into a sex-determining signal remains mysterious. This is partly because it is difficult to distinguish the primary molecular events of TSD from the confounding downstream signatures of sexual differentiation. We use the Australian central bearded dragon, in which chromosomal sex determination is overridden at high temperatures to produce sex-reversed female offspring, as a unique model to identify TSD-specific features of the transcriptome. We show that an intron is retained in mature transcripts from each of two Jumonji family genes, JARID2 and JMJD3, in female dragons that have been sex-reversed by temperature but not in normal chromosomal females or males. JARID2 is a component of the master chromatin modifier Polycomb Repressive Complex 2, and the mammalian sex-determining factor SRY is directly regulated by an independent but closely related Jumonji family member. We propose that the perturbation of JARID2/JMJD3 function by intron retention alters the epigenetic landscape to override chromosomal sex-determining cues, triggering sex reversal at extreme temperatures. Sex reversal may then facilitate a transition from genetic sex determination to TSD, with JARID2/JMJD3 intron retention preserved as the decisive regulatory signal. Significantly, we also observe sex-associated differential retention of the equivalent introns in JARID2/JMJD3 transcripts expressed in embryonic gonads from TSD alligators and turtles, indicative of a reptile-wide mechanism controlling TSD.",
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    Differential intron retention in Jumonji chromatin modifier genes is implicated in reptile temperature-dependent sex determination. / Deveson, Ira W.; Holleley, Clare E.; Blackburn, James; Graves, Jennifer A. Marshall; Mattick, John S.; Waters, Paul D.; Georges, Arthur.

    In: Science Advances, Vol. 3, No. 6, e1700731, 06.2017.

    Research output: Contribution to journalArticle

    TY - JOUR

    T1 - Differential intron retention in Jumonji chromatin modifier genes is implicated in reptile temperature-dependent sex determination

    AU - Deveson, Ira W.

    AU - Holleley, Clare E.

    AU - Blackburn, James

    AU - Graves, Jennifer A. Marshall

    AU - Mattick, John S.

    AU - Waters, Paul D.

    AU - Georges, Arthur

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    N2 - In many vertebrates, sex of offspring is determined by external environmental cues rather than by sex chromosomes. In reptiles, for instance, temperature-dependent sex determination (TSD) is common. Despite decades of work, the mechanism by which temperature is converted into a sex-determining signal remains mysterious. This is partly because it is difficult to distinguish the primary molecular events of TSD from the confounding downstream signatures of sexual differentiation. We use the Australian central bearded dragon, in which chromosomal sex determination is overridden at high temperatures to produce sex-reversed female offspring, as a unique model to identify TSD-specific features of the transcriptome. We show that an intron is retained in mature transcripts from each of two Jumonji family genes, JARID2 and JMJD3, in female dragons that have been sex-reversed by temperature but not in normal chromosomal females or males. JARID2 is a component of the master chromatin modifier Polycomb Repressive Complex 2, and the mammalian sex-determining factor SRY is directly regulated by an independent but closely related Jumonji family member. We propose that the perturbation of JARID2/JMJD3 function by intron retention alters the epigenetic landscape to override chromosomal sex-determining cues, triggering sex reversal at extreme temperatures. Sex reversal may then facilitate a transition from genetic sex determination to TSD, with JARID2/JMJD3 intron retention preserved as the decisive regulatory signal. Significantly, we also observe sex-associated differential retention of the equivalent introns in JARID2/JMJD3 transcripts expressed in embryonic gonads from TSD alligators and turtles, indicative of a reptile-wide mechanism controlling TSD.

    AB - In many vertebrates, sex of offspring is determined by external environmental cues rather than by sex chromosomes. In reptiles, for instance, temperature-dependent sex determination (TSD) is common. Despite decades of work, the mechanism by which temperature is converted into a sex-determining signal remains mysterious. This is partly because it is difficult to distinguish the primary molecular events of TSD from the confounding downstream signatures of sexual differentiation. We use the Australian central bearded dragon, in which chromosomal sex determination is overridden at high temperatures to produce sex-reversed female offspring, as a unique model to identify TSD-specific features of the transcriptome. We show that an intron is retained in mature transcripts from each of two Jumonji family genes, JARID2 and JMJD3, in female dragons that have been sex-reversed by temperature but not in normal chromosomal females or males. JARID2 is a component of the master chromatin modifier Polycomb Repressive Complex 2, and the mammalian sex-determining factor SRY is directly regulated by an independent but closely related Jumonji family member. We propose that the perturbation of JARID2/JMJD3 function by intron retention alters the epigenetic landscape to override chromosomal sex-determining cues, triggering sex reversal at extreme temperatures. Sex reversal may then facilitate a transition from genetic sex determination to TSD, with JARID2/JMJD3 intron retention preserved as the decisive regulatory signal. Significantly, we also observe sex-associated differential retention of the equivalent introns in JARID2/JMJD3 transcripts expressed in embryonic gonads from TSD alligators and turtles, indicative of a reptile-wide mechanism controlling TSD.

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    KW - Biomarkers

    KW - Chromatin/genetics

    KW - Computational Biology/methods

    KW - Female

    KW - Gene Expression Profiling

    KW - Gene Expression Regulation, Developmental

    KW - Genes, Modifier

    KW - Introns

    KW - Male

    KW - Models, Genetic

    KW - Reptiles/genetics

    KW - Sex Determination Processes/genetics

    KW - Temperature

    KW - Transcriptome

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    UR - http://purl.org/au-research/grants/arc/DP170101147

    UR - http://www.scopus.com/inward/record.url?scp=85029830052&partnerID=8YFLogxK

    UR - http://www.mendeley.com/research/differential-intron-retention-jumonji-chromatin-modifier-genes-implicated-reptile-temperaturedepende

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    DO - 10.1126/sciadv.1700731

    M3 - Article

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    JO - Science Advances

    JF - Science Advances

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