TY - JOUR
T1 - First chromosomal analysis in Gymnarchus niloticus (Gymnarchidae: Osteoglossiformes):
T2 - insights into the karyotype evolution of this ancient fish order
AU - Hatanaka, Terumi
AU - De Oliveira, Ezequiel Aguiar
AU - Ráb, Petr
AU - Yano, Cassia Fernanda
AU - Bertollo, Luiz Antônio Carlos
AU - EZAZ, Tariq
AU - Jegedi, Oladele OI
AU - Liehr, Thomas
AU - Olaleye, Victor F
AU - Cioffi, Marcelo DB
N1 - Funding Information:
This study was supported by Conselho Nacional de Desenvolvimento Científico e Tecnológico - CNPq (Process Nos 401962/2016-4 and 304992/2015-1), Fundação de Amparo à Pesquisa do Estado de São Paulo-FAPESP (Process No. 2016/22196-2) and CAPES/Alexander von Humboldt (Process No. 88881.136128/2017-01); further, by the project EXCELLENCE CZ.02.1.01/0.0/0.0/15_003/000 0460 OP RDE and with institutional support RVO:
Funding Information:
This study was supported by Conselho Nacional de Desenvolvimento Científico e Tecnológico-CNPq (Process Nos 401962/2016-4 and 304992/2015-1), Fundação de Amparo à Pesquisa do Estado de São Paulo-FAPESP (Process No. 2016/22196-2) and CAPES/Alexander von Humboldt (Process No. 88881.136128/2017-01); further, by the project EXCELLENCE CZ.02.1.01/0.0/0.0/15_003/000 0460 OP RDE and with institutional support RVO: 67985904 (P.R.). We would also like to thank the two anonymous reviewers for their helpful comments. No competing financial interests exist.
Publisher Copyright:
© 2018 The Linnean Society of London.
PY - 2018/7/20
Y1 - 2018/7/20
N2 - Osteoglossiformes is one of the most ancient (Early Triassic) groups of freshwater teleosts and has at least one representative on each continent of the Southern Hemisphere, with the exception of Antarctica. Among its six described families, the Gymnarchidae occurs in many African rivers, including the river Nile, where Gymnarchus niloticus is its only representative. In this study we provide, for the first time, a comprehensive cytogenetic analysis for G. niloticus, which includes definition of the standard karyotype, C-banding, repetitive DNA mapping and comparative genomic hybridization, in order to investigate its chromosomal patterns and provide new data for comparative analyses with other Osteoglossiformes species. The 2n was 34 (26 metacentric + 8 submetacentric) in both sexes, and C-positive heterochromatic bands were detected in the centromeric/pericentromeric regions of all chromosomes. The simultaneous detection of 18S and 5S ribosomal DNAs showed simple and non-syntenical locations for such sequences, and a Chromomycin A3-positive band was observed, which is co-localized within the 18S ribosomal RNA gene sequences. Fluorescence in situ hybridization using U2 small nuclear RNA, Rex6 and some microssatelites as probes showed a scattered distribution among chromosomes. Data from comparative genomic hybridization experiments with some other African Osteoglossiformes species showed that all these species have an advanced stage of sequence divergence. The results highlight the evolutionary diversification of osteoglossiform fishes.
AB - Osteoglossiformes is one of the most ancient (Early Triassic) groups of freshwater teleosts and has at least one representative on each continent of the Southern Hemisphere, with the exception of Antarctica. Among its six described families, the Gymnarchidae occurs in many African rivers, including the river Nile, where Gymnarchus niloticus is its only representative. In this study we provide, for the first time, a comprehensive cytogenetic analysis for G. niloticus, which includes definition of the standard karyotype, C-banding, repetitive DNA mapping and comparative genomic hybridization, in order to investigate its chromosomal patterns and provide new data for comparative analyses with other Osteoglossiformes species. The 2n was 34 (26 metacentric + 8 submetacentric) in both sexes, and C-positive heterochromatic bands were detected in the centromeric/pericentromeric regions of all chromosomes. The simultaneous detection of 18S and 5S ribosomal DNAs showed simple and non-syntenical locations for such sequences, and a Chromomycin A3-positive band was observed, which is co-localized within the 18S ribosomal RNA gene sequences. Fluorescence in situ hybridization using U2 small nuclear RNA, Rex6 and some microssatelites as probes showed a scattered distribution among chromosomes. Data from comparative genomic hybridization experiments with some other African Osteoglossiformes species showed that all these species have an advanced stage of sequence divergence. The results highlight the evolutionary diversification of osteoglossiform fishes.
KW - Ancient fishes
KW - Chromosome banding
KW - Comparative genomic hybrydization
KW - Karyotype evolution
KW - Molecular cytogenetics
UR - http://www.scopus.com/inward/record.url?scp=85054860856&partnerID=8YFLogxK
UR - http://www.mendeley.com/research/first-chromosomal-analysis-gymnarchus-niloticus-gymnarchidae-osteoglossiformes-insights-karyotype-ev-1
U2 - 10.1093/biolinnean/bly098
DO - 10.1093/biolinnean/bly098
M3 - Article
SN - 0024-4066
VL - 125
SP - 83
EP - 92
JO - Biological Journal of the Linnean Society
JF - Biological Journal of the Linnean Society
IS - 1
ER -