Isolation and characterisation of novel microsatellite and mitochondrial DNA markers for the Eastern Water Dragon (Physignathus lesueurii)

C.H. Frère, P.J. Prentis, T. Ezaz, A. Georges

    Research output: Contribution to journalArticle

    5 Citations (Scopus)

    Abstract

    Habitat fragmentation as a result of urbanisation
    is a growing problem for native lizard species. The
    Eastern Water Dragon (Physignathus lesueurii) is a social
    arboreal agamid lizard, native to Australia. This species
    represents an ideal model species to investigate the effect
    of urbanisation because of their prominent abundance in
    the urban landscape. Here we describe the isolation and
    characterisation of a novel set of 74 di-, tri-, and tetramicrosatellites
    from which 18 were selected and optimised
    into two multiplexes. The 18 microsatellites generated a
    total 148 alleles across the two populations. The number of
    alleles per locus varied from 2 to 18 alleles and measures
    of Ho and He varied from 0.395 to 0.877 and from 0.441
    to 0.880, respectively. We also present primers for four
    novel mitochondrial DNA (mtDNA) markers. The combined
    length of the four mtDNA marker pairs was 2,528 bp
    which included 15 nucleotides changes. In comparison to
    threatened species, which are generally characterised by
    small population sizes, the Eastern Water Dragon represents
    an ideal model species to investigate the effect of
    urbanisation on their behavioural ecology and connectivity
    patterns among populations.
    Original languageUndefined
    Pages (from-to)113-116
    Number of pages4
    JournalConservation Genetics Resources
    Volume4
    Issue number1
    DOIs
    Publication statusPublished - 2012

    Cite this

    @article{1d523479b4c1408c89d2f29ad4ee65f6,
    title = "Isolation and characterisation of novel microsatellite and mitochondrial DNA markers for the Eastern Water Dragon (Physignathus lesueurii)",
    abstract = "Habitat fragmentation as a result of urbanisationis a growing problem for native lizard species. TheEastern Water Dragon (Physignathus lesueurii) is a socialarboreal agamid lizard, native to Australia. This speciesrepresents an ideal model species to investigate the effectof urbanisation because of their prominent abundance inthe urban landscape. Here we describe the isolation andcharacterisation of a novel set of 74 di-, tri-, and tetramicrosatellitesfrom which 18 were selected and optimisedinto two multiplexes. The 18 microsatellites generated atotal 148 alleles across the two populations. The number ofalleles per locus varied from 2 to 18 alleles and measuresof Ho and He varied from 0.395 to 0.877 and from 0.441to 0.880, respectively. We also present primers for fournovel mitochondrial DNA (mtDNA) markers. The combinedlength of the four mtDNA marker pairs was 2,528 bpwhich included 15 nucleotides changes. In comparison tothreatened species, which are generally characterised bysmall population sizes, the Eastern Water Dragon representsan ideal model species to investigate the effect ofurbanisation on their behavioural ecology and connectivitypatterns among populations.",
    author = "C.H. Fr{\`e}re and P.J. Prentis and T. Ezaz and A. Georges",
    note = "cited By 4",
    year = "2012",
    doi = "10.1007/s12686-011-9487-3",
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    journal = "Conservation Genetics Resoures",
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    TY - JOUR

    T1 - Isolation and characterisation of novel microsatellite and mitochondrial DNA markers for the Eastern Water Dragon (Physignathus lesueurii)

    AU - Frère, C.H.

    AU - Prentis, P.J.

    AU - Ezaz, T.

    AU - Georges, A.

    N1 - cited By 4

    PY - 2012

    Y1 - 2012

    N2 - Habitat fragmentation as a result of urbanisationis a growing problem for native lizard species. TheEastern Water Dragon (Physignathus lesueurii) is a socialarboreal agamid lizard, native to Australia. This speciesrepresents an ideal model species to investigate the effectof urbanisation because of their prominent abundance inthe urban landscape. Here we describe the isolation andcharacterisation of a novel set of 74 di-, tri-, and tetramicrosatellitesfrom which 18 were selected and optimisedinto two multiplexes. The 18 microsatellites generated atotal 148 alleles across the two populations. The number ofalleles per locus varied from 2 to 18 alleles and measuresof Ho and He varied from 0.395 to 0.877 and from 0.441to 0.880, respectively. We also present primers for fournovel mitochondrial DNA (mtDNA) markers. The combinedlength of the four mtDNA marker pairs was 2,528 bpwhich included 15 nucleotides changes. In comparison tothreatened species, which are generally characterised bysmall population sizes, the Eastern Water Dragon representsan ideal model species to investigate the effect ofurbanisation on their behavioural ecology and connectivitypatterns among populations.

    AB - Habitat fragmentation as a result of urbanisationis a growing problem for native lizard species. TheEastern Water Dragon (Physignathus lesueurii) is a socialarboreal agamid lizard, native to Australia. This speciesrepresents an ideal model species to investigate the effectof urbanisation because of their prominent abundance inthe urban landscape. Here we describe the isolation andcharacterisation of a novel set of 74 di-, tri-, and tetramicrosatellitesfrom which 18 were selected and optimisedinto two multiplexes. The 18 microsatellites generated atotal 148 alleles across the two populations. The number ofalleles per locus varied from 2 to 18 alleles and measuresof Ho and He varied from 0.395 to 0.877 and from 0.441to 0.880, respectively. We also present primers for fournovel mitochondrial DNA (mtDNA) markers. The combinedlength of the four mtDNA marker pairs was 2,528 bpwhich included 15 nucleotides changes. In comparison tothreatened species, which are generally characterised bysmall population sizes, the Eastern Water Dragon representsan ideal model species to investigate the effect ofurbanisation on their behavioural ecology and connectivitypatterns among populations.

    U2 - 10.1007/s12686-011-9487-3

    DO - 10.1007/s12686-011-9487-3

    M3 - Article

    VL - 4

    SP - 113

    EP - 116

    JO - Conservation Genetics Resoures

    JF - Conservation Genetics Resoures

    SN - 1877-7252

    IS - 1

    ER -