Short-read fastA files dataset from complexity-reduced genotyping by sequencing data of bacterial isolates from a public hospital in Australia

Berenice Talamantes-Becerra, J. Carling, Karina Kennedy, Michelle E. Gahan, Arthur Georges

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Abstract

This data article contains short-read sequences (length 30–69 bp) obtained from complexity-reduced genotyping by sequencing (GBS) of 165 samples bacterial isolates from hospital patients in the Australian Capital Territory, between 2013 and 2015. These samples represented 14 bacterial species. Data format is shown as filtered fastA files obtained from an Illumina HiSeq2500 sequencer. The experimental factors of this research used three complexity reduction methods with three combinations of restriction enzymes: PstI with MseI, PstI with HpaII and MseI with HpaII.

Original languageEnglish
Article number104273
Pages (from-to)1-7
Number of pages7
JournalData in Brief
Volume25
DOIs
Publication statusPublished - Aug 2019

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Australian Capital Territory
Public Hospitals
Research
Datasets
CTGCAG-specific type II deoxyribonucleases

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Talamantes-Becerra, Berenice ; Carling, J. ; Kennedy, Karina ; Gahan, Michelle E. ; Georges, Arthur. / Short-read fastA files dataset from complexity-reduced genotyping by sequencing data of bacterial isolates from a public hospital in Australia. In: Data in Brief. 2019 ; Vol. 25. pp. 1-7.
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Short-read fastA files dataset from complexity-reduced genotyping by sequencing data of bacterial isolates from a public hospital in Australia. / Talamantes-Becerra, Berenice; Carling, J.; Kennedy, Karina; Gahan, Michelle E.; Georges, Arthur.

In: Data in Brief, Vol. 25, 104273, 08.2019, p. 1-7.

Research output: Contribution to journalArticle

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