Abstract
This data article contains short-read sequences (length 30–69 bp) obtained from complexity-reduced genotyping by sequencing (GBS) of 165 samples bacterial isolates from hospital patients in the Australian Capital Territory, between 2013 and 2015. These samples represented 14 bacterial species. Data format is shown as filtered fastA files obtained from an Illumina HiSeq2500 sequencer. The experimental factors of this research used three complexity reduction methods with three combinations of restriction enzymes: PstI with MseI, PstI with HpaII and MseI with HpaII.
| Original language | English |
|---|---|
| Article number | 104273 |
| Pages (from-to) | 1-7 |
| Number of pages | 7 |
| Journal | Data in Brief |
| Volume | 25 |
| DOIs | |
| Publication status | Published - Aug 2019 |
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Short-read fastA files dataset from complexity-reduced genotyping by sequencing data of bacterial isolates from a public hospital in Australia. / Talamantes-Becerra, Berenice; Carling, J.; Kennedy, Karina; Gahan, Michelle E.; Georges, Arthur.
In: Data in Brief, Vol. 25, 104273, 08.2019, p. 1-7.Research output: Contribution to journal › Article
TY - JOUR
T1 - Short-read fastA files dataset from complexity-reduced genotyping by sequencing data of bacterial isolates from a public hospital in Australia
AU - Talamantes-Becerra, Berenice
AU - Carling, J.
AU - Kennedy, Karina
AU - Gahan, Michelle E.
AU - Georges, Arthur
PY - 2019/8
Y1 - 2019/8
N2 - This data article contains short-read sequences (length 30–69 bp) obtained from complexity-reduced genotyping by sequencing (GBS) of 165 samples bacterial isolates from hospital patients in the Australian Capital Territory, between 2013 and 2015. These samples represented 14 bacterial species. Data format is shown as filtered fastA files obtained from an Illumina HiSeq2500 sequencer. The experimental factors of this research used three complexity reduction methods with three combinations of restriction enzymes: PstI with MseI, PstI with HpaII and MseI with HpaII.
AB - This data article contains short-read sequences (length 30–69 bp) obtained from complexity-reduced genotyping by sequencing (GBS) of 165 samples bacterial isolates from hospital patients in the Australian Capital Territory, between 2013 and 2015. These samples represented 14 bacterial species. Data format is shown as filtered fastA files obtained from an Illumina HiSeq2500 sequencer. The experimental factors of this research used three complexity reduction methods with three combinations of restriction enzymes: PstI with MseI, PstI with HpaII and MseI with HpaII.
KW - Bacterial pathogens
KW - Genotyping
KW - Short-read sequences
UR - http://www.scopus.com/inward/record.url?scp=85069667269&partnerID=8YFLogxK
UR - http://www.mendeley.com/research/shortread-fasta-files-dataset-complexityreduced-genotyping-sequencing-data-bacterial-isolates-public
U2 - 10.1016/j.dib.2019.104273
DO - 10.1016/j.dib.2019.104273
M3 - Article
VL - 25
SP - 1
EP - 7
JO - Data in Brief
JF - Data in Brief
SN - 2352-3409
M1 - 104273
ER -