Task 2: ShARe/CLEF eHealth evaluation lab 2013

Danielle L. Mowery, Brett R. South, Lee Christensen, Laura Maria Murtola, Sanna Salanterä, Hanna Suominen, David Martinez, Noemie Elhadad, Sameer Pradhan, Guergana Savova, Wendy W. Chapman

Research output: A Conference proceeding or a Chapter in BookConference contribution

4 Citations (Scopus)

Abstract

In this pilot study, we aimed to generate a reference standard of clinical acronyms and abbreviations normalized to concepts from a standardized, medical vocabulary for the ShARe/CLEF eHealth 2013 challenge. In this paper, we review prior text normalization shared tasks, reference standard generation approaches, and recent clinical acronym and abbreviation normalization research.We report inter-annotator agreement for the reference standard and performance for participant systems.

Original languageEnglish
Title of host publication2013 Cross Language Evaluation Forum Conference, CLEF 2013
Subtitle of host publicationCEUR Workshop Proceedings
EditorsP. Forner, N. Ferro, R. Navigli, D. Tufis
Place of PublicationValencia, Spain
Pages1-11
Number of pages11
Volume1179
Publication statusPublished - 8 Sep 2013
Externally publishedYes

Publication series

Name
PublisherCEUR-WS
Volume1179
ISSN (Print)1613-0073

Cite this

Mowery, D. L., South, B. R., Christensen, L., Murtola, L. M., Salanterä, S., Suominen, H., ... Chapman, W. W. (2013). Task 2: ShARe/CLEF eHealth evaluation lab 2013. In P. Forner, N. Ferro, R. Navigli, & D. Tufis (Eds.), 2013 Cross Language Evaluation Forum Conference, CLEF 2013: CEUR Workshop Proceedings (Vol. 1179, pp. 1-11). Valencia, Spain. CEUR Workshop Proceedings
Mowery, Danielle L. ; South, Brett R. ; Christensen, Lee ; Murtola, Laura Maria ; Salanterä, Sanna ; Suominen, Hanna ; Martinez, David ; Elhadad, Noemie ; Pradhan, Sameer ; Savova, Guergana ; Chapman, Wendy W. / Task 2: ShARe/CLEF eHealth evaluation lab 2013. 2013 Cross Language Evaluation Forum Conference, CLEF 2013: CEUR Workshop Proceedings. editor / P. Forner ; N. Ferro ; R. Navigli ; D. Tufis. Vol. 1179 Valencia, Spain, 2013. pp. 1-11 (CEUR Workshop Proceedings).
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title = "Task 2: ShARe/CLEF eHealth evaluation lab 2013",
abstract = "In this pilot study, we aimed to generate a reference standard of clinical acronyms and abbreviations normalized to concepts from a standardized, medical vocabulary for the ShARe/CLEF eHealth 2013 challenge. In this paper, we review prior text normalization shared tasks, reference standard generation approaches, and recent clinical acronym and abbreviation normalization research.We report inter-annotator agreement for the reference standard and performance for participant systems.",
keywords = "Natural language processing, Reference standard generation, Text normalization",
author = "Mowery, {Danielle L.} and South, {Brett R.} and Lee Christensen and Murtola, {Laura Maria} and Sanna Salanter{\"a} and Hanna Suominen and David Martinez and Noemie Elhadad and Sameer Pradhan and Guergana Savova and Chapman, {Wendy W.}",
year = "2013",
month = "9",
day = "8",
language = "English",
volume = "1179",
publisher = "CEUR-WS",
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editor = "P. Forner and N. Ferro and R. Navigli and D. Tufis",
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Mowery, DL, South, BR, Christensen, L, Murtola, LM, Salanterä, S, Suominen, H, Martinez, D, Elhadad, N, Pradhan, S, Savova, G & Chapman, WW 2013, Task 2: ShARe/CLEF eHealth evaluation lab 2013. in P Forner, N Ferro, R Navigli & D Tufis (eds), 2013 Cross Language Evaluation Forum Conference, CLEF 2013: CEUR Workshop Proceedings. vol. 1179, Valencia, Spain, CEUR Workshop Proceedings, pp. 1-11.

Task 2: ShARe/CLEF eHealth evaluation lab 2013. / Mowery, Danielle L.; South, Brett R.; Christensen, Lee; Murtola, Laura Maria; Salanterä, Sanna; Suominen, Hanna; Martinez, David; Elhadad, Noemie; Pradhan, Sameer; Savova, Guergana; Chapman, Wendy W.

2013 Cross Language Evaluation Forum Conference, CLEF 2013: CEUR Workshop Proceedings. ed. / P. Forner; N. Ferro; R. Navigli; D. Tufis. Vol. 1179 Valencia, Spain, 2013. p. 1-11 (CEUR Workshop Proceedings).

Research output: A Conference proceeding or a Chapter in BookConference contribution

TY - GEN

T1 - Task 2: ShARe/CLEF eHealth evaluation lab 2013

AU - Mowery, Danielle L.

AU - South, Brett R.

AU - Christensen, Lee

AU - Murtola, Laura Maria

AU - Salanterä, Sanna

AU - Suominen, Hanna

AU - Martinez, David

AU - Elhadad, Noemie

AU - Pradhan, Sameer

AU - Savova, Guergana

AU - Chapman, Wendy W.

PY - 2013/9/8

Y1 - 2013/9/8

N2 - In this pilot study, we aimed to generate a reference standard of clinical acronyms and abbreviations normalized to concepts from a standardized, medical vocabulary for the ShARe/CLEF eHealth 2013 challenge. In this paper, we review prior text normalization shared tasks, reference standard generation approaches, and recent clinical acronym and abbreviation normalization research.We report inter-annotator agreement for the reference standard and performance for participant systems.

AB - In this pilot study, we aimed to generate a reference standard of clinical acronyms and abbreviations normalized to concepts from a standardized, medical vocabulary for the ShARe/CLEF eHealth 2013 challenge. In this paper, we review prior text normalization shared tasks, reference standard generation approaches, and recent clinical acronym and abbreviation normalization research.We report inter-annotator agreement for the reference standard and performance for participant systems.

KW - Natural language processing

KW - Reference standard generation

KW - Text normalization

UR - http://www.scopus.com/inward/record.url?scp=84922032587&partnerID=8YFLogxK

M3 - Conference contribution

VL - 1179

SP - 1

EP - 11

BT - 2013 Cross Language Evaluation Forum Conference, CLEF 2013

A2 - Forner, P.

A2 - Ferro, N.

A2 - Navigli, R.

A2 - Tufis, D.

CY - Valencia, Spain

ER -

Mowery DL, South BR, Christensen L, Murtola LM, Salanterä S, Suominen H et al. Task 2: ShARe/CLEF eHealth evaluation lab 2013. In Forner P, Ferro N, Navigli R, Tufis D, editors, 2013 Cross Language Evaluation Forum Conference, CLEF 2013: CEUR Workshop Proceedings. Vol. 1179. Valencia, Spain. 2013. p. 1-11. (CEUR Workshop Proceedings).